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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

High-plex imaging of RNA and proteins at subcellular resolution in fixed tissue by spatial molecular imaging
Shanshan He, Ruchir Bhatt, Carl Brown, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 12, pp. 1794-1806
Closed Access | Times Cited: 353

Showing 26-50 of 353 citing articles:

BIDCell: Biologically-informed self-supervised learning for segmentation of subcellular spatial transcriptomics data
Xiaohang Fu, Yingxin Lin, David Lin, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 20
Best practices for the execution, analysis, and data storage of plant single-cell/nucleus transcriptomics
Carolin Grones, Thomas Eekhout, Dongbo Shi, et al.
The Plant Cell (2024) Vol. 36, Iss. 4, pp. 812-828
Open Access | Times Cited: 20
Multiplex protein imaging in tumour biology
Natalie de Souza, Shan Zhao, Bernd Bodenmiller
Nature reviews. Cancer (2024) Vol. 24, Iss. 3, pp. 171-191
Closed Access | Times Cited: 17
Profiling cell identity and tissue architecture with single-cell and spatial transcriptomics
Gunsagar S. Gulati, Jeremy Philip D’Silva, Yunhe Liu, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 26, Iss. 1, pp. 11-31
Closed Access | Times Cited: 16
Comparative analysis of multiplexed in situ gene expression profiling technologies
Austin Hartman, Rahul Satija
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 15
Spatial multi-omics: novel tools to study the complexity of cardiovascular diseases
Paul Kießling, Christoph Kuppe
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 15
Nuclei segmentation using attention aware and adversarial networks
Evgin Göçeri
Neurocomputing (2024) Vol. 579, pp. 127445-127445
Closed Access | Times Cited: 15
Spatial transcriptomics in health and disease
Sanjay Jain, Michael T. Eadon
Nature Reviews Nephrology (2024) Vol. 20, Iss. 10, pp. 659-671
Closed Access | Times Cited: 15
Deciphering spatial domains from spatial multi-omics with SpatialGlue
Yahui Long, Kok Siong Ang, Raman Sethi, et al.
Nature Methods (2024) Vol. 21, Iss. 9, pp. 1658-1667
Open Access | Times Cited: 15
Microglia-astrocyte crosstalk in the amyloid plaque niche of an Alzheimer’s disease mouse model, as revealed by spatial transcriptomics
Anna Mallach, Magdalena Zielonka, Veerle van Lieshout, et al.
Cell Reports (2024) Vol. 43, Iss. 6, pp. 114216-114216
Open Access | Times Cited: 14
Mapping cancer biology in space: applications and perspectives on spatial omics for oncology
Sumin Lee, Gyeongjun Kim, JinYoung Lee, et al.
Molecular Cancer (2024) Vol. 23, Iss. 1
Open Access | Times Cited: 13
Using a pan-cancer atlas to investigate tumour associated macrophages as regulators of immunotherapy response
Alexander Coulton, Jun Murai, Danwen Qian, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 13
Cell–cell communication: new insights and clinical implications
Jimeng Su, Ying Song, Zhipeng Zhu, et al.
Signal Transduction and Targeted Therapy (2024) Vol. 9, Iss. 1
Open Access | Times Cited: 13
Gastric cancer immunosuppressive microenvironment heterogeneity: implications for therapy development
Tadahito Yasuda, Yanru Wang
Trends in cancer (2024) Vol. 10, Iss. 7, pp. 627-642
Open Access | Times Cited: 12
Advances in spatial transcriptomics and its applications in cancer research
Huazhe Yang, Yuanli Zuo, Gang Li, et al.
Molecular Cancer (2024) Vol. 23, Iss. 1
Open Access | Times Cited: 12
spaCI: deciphering spatial cellular communications through adaptive graph model
Ziyang Tang, Tonglin Zhang, Baijian Yang, et al.
Briefings in Bioinformatics (2022) Vol. 24, Iss. 1
Open Access | Times Cited: 47
Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding
Rongbo Shen, Lin Liu, Zihan Wu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 43
CellCharter reveals spatial cell niches associated with tissue remodeling and cell plasticity
Marco Varrone, Daniele Tavernari, Albert Santamaria‐Martínez, et al.
Nature Genetics (2023) Vol. 56, Iss. 1, pp. 74-84
Open Access | Times Cited: 35
A guidebook of spatial transcriptomic technologies, data resources and analysis approaches
Liangchen Yue, Feng Liu, Jiongsong Hu, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 940-955
Open Access | Times Cited: 32
Integration of spatial and single-cell data across modalities with weakly linked features
Shuxiao Chen, Bokai Zhu, Sijia Huang, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 7, pp. 1096-1106
Open Access | Times Cited: 32
SiGra: single-cell spatial elucidation through an image-augmented graph transformer
Ziyang Tang, Zuotian Li, Tieying Hou, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 31
Leveraging spatial transcriptomics data to recover cell locations in single-cell RNA-seq with CeLEry
Qihuang Zhang, Shunzhou Jiang, Amelia Schroeder, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 25
Spatial Transcriptomic Technologies
Tsai-Ying Chen, Li You, José A. Hardillo, et al.
Cells (2023) Vol. 12, Iss. 16, pp. 2042-2042
Open Access | Times Cited: 25
GeneSegNet: a deep learning framework for cell segmentation by integrating gene expression and imaging
Yuxing Wang, Wenguan Wang, Dongfang Liu, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 23
SpatialData: an open and universal data framework for spatial omics
Luca Marconato, Giovanni Palla, Kevin A. Yamauchi, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 21

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