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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Integrating single-cell transcriptomic data across different conditions, technologies, and species
Andrew Butler, Paul Hoffman, Peter Smibert, et al.
Nature Biotechnology (2018) Vol. 36, Iss. 5, pp. 411-420
Open Access | Times Cited: 10774

Showing 26-50 of 10774 citing articles:

Single-Cell Analyses Inform Mechanisms of Myeloid-Targeted Therapies in Colon Cancer
Lei Zhang, Ziyi Li, Katarzyna M. Skrzypczynska, et al.
Cell (2020) Vol. 181, Iss. 2, pp. 442-459.e29
Open Access | Times Cited: 1047
Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity
Joshua D. Welch, Velina Kozareva, Ashley N. Ferreira, et al.
Cell (2019) Vol. 177, Iss. 7, pp. 1873-1887.e17
Open Access | Times Cited: 1039
Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution
Takahiro Masuda, Roman Sankowski, Ori Staszewski, et al.
Nature (2019) Vol. 566, Iss. 7744, pp. 388-392
Open Access | Times Cited: 1026
Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 992
Challenges in unsupervised clustering of single-cell RNA-seq data
Vladimir Yu Kiselev, Tallulah Andrews, Martin Hemberg
Nature Reviews Genetics (2019) Vol. 20, Iss. 5, pp. 273-282
Closed Access | Times Cited: 985
SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data
Matthew D. Young, Sam Behjati
GigaScience (2020) Vol. 9, Iss. 12
Open Access | Times Cited: 977
Single-cell chromatin state analysis with Signac
Tim Stuart, Avi Srivastava, Shaista Madad, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1333-1341
Open Access | Times Cited: 976
Exploring tissue architecture using spatial transcriptomics
Anjali Rao, Dalia Barkley, Gustavo S. França, et al.
Nature (2021) Vol. 596, Iss. 7871, pp. 211-220
Open Access | Times Cited: 975
Lineage tracking reveals dynamic relationships of T cells in colorectal cancer
Lei Zhang, Xin Yu, Liangtao Zheng, et al.
Nature (2018) Vol. 564, Iss. 7735, pp. 268-272
Closed Access | Times Cited: 969
The protein expression profile of ACE2 in human tissues
Feria Hikmet, Loren Méar, Åsa Edvinsson, et al.
Molecular Systems Biology (2020) Vol. 16, Iss. 7
Open Access | Times Cited: 931
Electrical and synaptic integration of glioma into neural circuits
Humsa S. Venkatesh, Wade Morishita, Anna C. Geraghty, et al.
Nature (2019) Vol. 573, Iss. 7775, pp. 539-545
Open Access | Times Cited: 910
Single-cell RNA-seq highlights intra-tumoral heterogeneity and malignant progression in pancreatic ductal adenocarcinoma
Junya Peng, Baofa Sun, Chuanyuan Chen, et al.
Cell Research (2019) Vol. 29, Iss. 9, pp. 725-738
Open Access | Times Cited: 906
Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)
Andrea Cossarizza, Hyun‐Dong Chang, Andreas Radbruch, et al.
European Journal of Immunology (2019) Vol. 49, Iss. 10, pp. 1457-1973
Open Access | Times Cited: 863
Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis, et al.
Genome biology (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 861
Human and mouse single-nucleus transcriptomics reveal TREM2-dependent and TREM2-independent cellular responses in Alzheimer’s disease
Yingyue Zhou, Wilbur M. Song, Prabhakar S. Andhey, et al.
Nature Medicine (2020) Vol. 26, Iss. 1, pp. 131-142
Open Access | Times Cited: 841
Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma
Nayoung Kim, Hong Kwan Kim, Kyungjong Lee, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 836
A benchmark of batch-effect correction methods for single-cell RNA sequencing data
Hoa Tran, Kok Siong Ang, Marion Chevrier, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 828
Individual brain organoids reproducibly form cell diversity of the human cerebral cortex
Silvia Velasco, Amanda J. Kedaigle, Sean Simmons, et al.
Nature (2019) Vol. 570, Iss. 7762, pp. 523-527
Open Access | Times Cited: 826
Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19
Jeong Seok Lee, Seong-Wan Park, Hye Won Jeong, et al.
Science Immunology (2020) Vol. 5, Iss. 49
Open Access | Times Cited: 803
A cellular census of human lungs identifies novel cell states in health and in asthma
Felipe A. Vieira Braga, Gozde Kar, Marijn Berg, et al.
Nature Medicine (2019) Vol. 25, Iss. 7, pp. 1153-1163
Open Access | Times Cited: 773
The Short Chain Fatty Acid Butyrate Imprints an Antimicrobial Program in Macrophages
Julie Schulthess, Sumeet Pandey, Melania Capitani, et al.
Immunity (2019) Vol. 50, Iss. 2, pp. 432-445.e7
Open Access | Times Cited: 771
The bone marrow microenvironment at single-cell resolution
Anastasia N. Tikhonova, Igor Dolgalev, Hai Hu, et al.
Nature (2019) Vol. 569, Iss. 7755, pp. 222-228
Open Access | Times Cited: 765
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Zizhen Yao, Cindy T. J. van Velthoven, Thuc Nghi Nguyen, et al.
Cell (2021) Vol. 184, Iss. 12, pp. 3222-3241.e26
Open Access | Times Cited: 764
A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation
Alexandra Grubman, Gabriel Chew, John F. Ouyang, et al.
Nature Neuroscience (2019) Vol. 22, Iss. 12, pp. 2087-2097
Closed Access | Times Cited: 752
Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma
Andrew L. Ji, Adam J. Rubin, Kim Thrane, et al.
Cell (2020) Vol. 182, Iss. 2, pp. 497-514.e22
Open Access | Times Cited: 748

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