
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Protein post-translational modifications: In silico prediction tools and molecular modeling
Martina Audagnotto, Matteo Dal Peraro
Computational and Structural Biotechnology Journal (2017) Vol. 15, pp. 307-319
Open Access | Times Cited: 176
Martina Audagnotto, Matteo Dal Peraro
Computational and Structural Biotechnology Journal (2017) Vol. 15, pp. 307-319
Open Access | Times Cited: 176
Showing 26-50 of 176 citing articles:
Recent advances in molecular farming using monocot plants
Malihe Mirzaee, Zhila Osmani, Jitka Frébortová, et al.
Biotechnology Advances (2022) Vol. 58, pp. 107913-107913
Closed Access | Times Cited: 25
Malihe Mirzaee, Zhila Osmani, Jitka Frébortová, et al.
Biotechnology Advances (2022) Vol. 58, pp. 107913-107913
Closed Access | Times Cited: 25
Genetic Analysis of ABCB4 Mutations and Variants Related to the Pathogenesis and Pathophysiology of Low Phospholipid-Associated Cholelithiasis
Helen H. Wang, Piero Portincasa, Min Liu, et al.
Genes (2022) Vol. 13, Iss. 6, pp. 1047-1047
Open Access | Times Cited: 23
Helen H. Wang, Piero Portincasa, Min Liu, et al.
Genes (2022) Vol. 13, Iss. 6, pp. 1047-1047
Open Access | Times Cited: 23
MIND-S is a deep-learning prediction model for elucidating protein post-translational modifications in human diseases
Yu Yan, Jyun‐Yu Jiang, Mingzhou Fu, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 3, pp. 100430-100430
Open Access | Times Cited: 13
Yu Yan, Jyun‐Yu Jiang, Mingzhou Fu, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 3, pp. 100430-100430
Open Access | Times Cited: 13
Analysis and review of techniques and tools based on machine learning and deep learning for prediction of lysine malonylation sites in protein sequences
Shahin Ramazi, Seyed Amir Hossein Tabatabaei, Elham Khalili, et al.
Database (2024) Vol. 2024
Open Access | Times Cited: 5
Shahin Ramazi, Seyed Amir Hossein Tabatabaei, Elham Khalili, et al.
Database (2024) Vol. 2024
Open Access | Times Cited: 5
Novel Ectodysplasin-A Variants: Structural and Functional Basis of Hypohidrotic Ectodermal Dysplasia
Prashant Ranjan, Chandra Devi, Rajesh Bansal, et al.
Research Square (Research Square) (2025)
Closed Access
Prashant Ranjan, Chandra Devi, Rajesh Bansal, et al.
Research Square (Research Square) (2025)
Closed Access
Peptides in Chronic Wound Healing: Fighting Infections and Facilitating Diabetic Wound Management
Muhammad Aquib, Tarun Kumar Sharma, Ved Prakash Giri, et al.
Journal of Drug Delivery Science and Technology (2025), pp. 106599-106599
Closed Access
Muhammad Aquib, Tarun Kumar Sharma, Ved Prakash Giri, et al.
Journal of Drug Delivery Science and Technology (2025), pp. 106599-106599
Closed Access
GraphPhos: Predict Protein-Phosphorylation Sites Based on Graph Neural Networks
Zeyu Wang, Xiaoli Yang, Shang Gao, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 3, pp. 941-941
Open Access
Zeyu Wang, Xiaoli Yang, Shang Gao, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 3, pp. 941-941
Open Access
Editorial: Advancements in proteomics and PTMomics: unveiling mechanistic insights and targeted therapies for metabolic diseases
Xiulan Chen, Yanchang Li, Daniela Braconi
Frontiers in Cell and Developmental Biology (2025) Vol. 13
Open Access
Xiulan Chen, Yanchang Li, Daniela Braconi
Frontiers in Cell and Developmental Biology (2025) Vol. 13
Open Access
Modern Approaches to Protein Constructions: A Comprehensive Review of Computational Tools and Databases for De Novo Protein Design and Engineering
Md. Mojnu Mia, Habiba Sultana, Md. Al Amin, et al.
Engineering Reports (2025) Vol. 7, Iss. 2
Open Access
Md. Mojnu Mia, Habiba Sultana, Md. Al Amin, et al.
Engineering Reports (2025) Vol. 7, Iss. 2
Open Access
Diagnostic and Therapeutic Implications of the SUMOylation Pathway in Acute Myeloid Leukemia
Elena Chatzikalil, Konstantinos Arvanitakis, Filippos Filippatos, et al.
Cancers (2025) Vol. 17, Iss. 4, pp. 631-631
Open Access
Elena Chatzikalil, Konstantinos Arvanitakis, Filippos Filippatos, et al.
Cancers (2025) Vol. 17, Iss. 4, pp. 631-631
Open Access
SUMO-LMNet: Lossless Mapping Network for Predicting SUMOylation Sites in SUMO1 and SUMO2 using High-Dimensional Features
Cheng‐Hsun Ho, Yen-Wei Chu, Lan-Ying Huang, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1048-1059
Open Access
Cheng‐Hsun Ho, Yen-Wei Chu, Lan-Ying Huang, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1048-1059
Open Access
Kinase-substrate prediction using an autoregressive model
Farzaneh Esmaili, Yongfang Qin, Duolin Wang, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1103-1111
Open Access
Farzaneh Esmaili, Yongfang Qin, Duolin Wang, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1103-1111
Open Access
Regulation and Function of the cGAS-STING Pathway: Mechanisms, Post-Translational Modifications, and Therapeutic Potential in Immunotherapy
Yuhan Chen, Shi‐Jun Yue, Lingyan Yu, et al.
Drug Design Development and Therapy (2025) Vol. Volume 19, pp. 1721-1739
Open Access
Yuhan Chen, Shi‐Jun Yue, Lingyan Yu, et al.
Drug Design Development and Therapy (2025) Vol. Volume 19, pp. 1721-1739
Open Access
Identification and computational analysis of conserved YXXΦ motifs in the pan-serotypes of dengue virus NS5 protein and their implications in host-virus interactions
Asma Khalil, Fatima Noor, Muhammad Tahir ul Qamar, et al.
Journal of Biomolecular Structure and Dynamics (2025), pp. 1-14
Closed Access
Asma Khalil, Fatima Noor, Muhammad Tahir ul Qamar, et al.
Journal of Biomolecular Structure and Dynamics (2025), pp. 1-14
Closed Access
Histone lysine succinylation: a comprehensive review of enzymatic pathways and disease associations
Minghui Zhang, Hu Peng, Zengqiang Liang, et al.
Genome Instability & Disease (2025)
Closed Access
Minghui Zhang, Hu Peng, Zengqiang Liang, et al.
Genome Instability & Disease (2025)
Closed Access
Post-translational modifications of epigenetic modifier TIP60: their role in cellular functions and cancer
Himanshu Gupta, Ashish Gupta
Epigenetics & Chromatin (2025) Vol. 18, Iss. 1
Open Access
Himanshu Gupta, Ashish Gupta
Epigenetics & Chromatin (2025) Vol. 18, Iss. 1
Open Access
P38 and JNK Mitogen-Activated Protein Kinases Interact With Chikungunya Virus Non-structural Protein-2 and Regulate TNF Induction During Viral Infection in Macrophages
Tapas Kumar Nayak, Prabhudutta Mamidi, Subhransu S. Sahoo, et al.
Frontiers in Immunology (2019) Vol. 10
Open Access | Times Cited: 35
Tapas Kumar Nayak, Prabhudutta Mamidi, Subhransu S. Sahoo, et al.
Frontiers in Immunology (2019) Vol. 10
Open Access | Times Cited: 35
DeepPPSite: A deep learning-based model for analysis and prediction of phosphorylation sites using efficient sequence information
Saeed Ahmed, Muhammad Kabir, Muhammad Arif, et al.
Analytical Biochemistry (2020) Vol. 612, pp. 113955-113955
Closed Access | Times Cited: 35
Saeed Ahmed, Muhammad Kabir, Muhammad Arif, et al.
Analytical Biochemistry (2020) Vol. 612, pp. 113955-113955
Closed Access | Times Cited: 35
Structural property, molecular regulation, and functional diversity of glutamine synthetase in higher plants: a data‐mining bioinformatics approach
Raju Mondal, Amit Kumar, Sanjib Kumar Chattopadhyay
The Plant Journal (2021) Vol. 108, Iss. 6, pp. 1565-1584
Open Access | Times Cited: 30
Raju Mondal, Amit Kumar, Sanjib Kumar Chattopadhyay
The Plant Journal (2021) Vol. 108, Iss. 6, pp. 1565-1584
Open Access | Times Cited: 30
TransPhos: A Deep-Learning Model for General Phosphorylation Site Prediction Based on Transformer-Encoder Architecture
Xun Wang, Zhiyuan Zhang, Chaogang Zhang, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 8, pp. 4263-4263
Open Access | Times Cited: 21
Xun Wang, Zhiyuan Zhang, Chaogang Zhang, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 8, pp. 4263-4263
Open Access | Times Cited: 21
Post‐translational modifications of vertebrate striated muscle myosin heavy chains
Paula Nieto Morales, Arianna N. Coons, Amelia J. Koopman, et al.
Cytoskeleton (2024)
Open Access | Times Cited: 4
Paula Nieto Morales, Arianna N. Coons, Amelia J. Koopman, et al.
Cytoskeleton (2024)
Open Access | Times Cited: 4
Implications of farnesyltransferase and its inhibitors as a promising strategy for cancer therapy
С. Г. Клочков, Маргарита Е. Неганова, Nagendra Sastry Yarla, et al.
Seminars in Cancer Biology (2017) Vol. 56, pp. 128-134
Closed Access | Times Cited: 35
С. Г. Клочков, Маргарита Е. Неганова, Nagendra Sastry Yarla, et al.
Seminars in Cancer Biology (2017) Vol. 56, pp. 128-134
Closed Access | Times Cited: 35
iProtGly‐SS: Identifying protein glycation sites using sequence and structure based features
Md Mofijul Islam, Sanjay Saha, Md Mahmudur Rahman, et al.
Proteins Structure Function and Bioinformatics (2018) Vol. 86, Iss. 7, pp. 777-789
Closed Access | Times Cited: 34
Md Mofijul Islam, Sanjay Saha, Md Mahmudur Rahman, et al.
Proteins Structure Function and Bioinformatics (2018) Vol. 86, Iss. 7, pp. 777-789
Closed Access | Times Cited: 34
Predicting the viability of beta-lactamase: How folding and binding free energies correlate with beta-lactamase fitness
Jordan Yang, Nandita Naik, Jagdish Suresh Patel, et al.
PLoS ONE (2020) Vol. 15, Iss. 5, pp. e0233509-e0233509
Open Access | Times Cited: 27
Jordan Yang, Nandita Naik, Jagdish Suresh Patel, et al.
PLoS ONE (2020) Vol. 15, Iss. 5, pp. e0233509-e0233509
Open Access | Times Cited: 27
Predicting phosphorylation sites using machine learning by integrating the sequence, structure, and functional information of proteins
Salma Jamal, Waseem Ali, Priya Nagpal, et al.
Journal of Translational Medicine (2021) Vol. 19, Iss. 1
Open Access | Times Cited: 24
Salma Jamal, Waseem Ali, Priya Nagpal, et al.
Journal of Translational Medicine (2021) Vol. 19, Iss. 1
Open Access | Times Cited: 24