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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Finding the ΔΔG spot: Are predictors of binding affinity changes upon mutations in protein–protein interactions ready for it?
Cunliang Geng, Li C. Xue, Jorge Roel‐Touris, et al.
Wiley Interdisciplinary Reviews Computational Molecular Science (2019) Vol. 9, Iss. 5
Open Access | Times Cited: 93

Showing 26-50 of 93 citing articles:

Repertoire-scale measures of antigen binding
Rohit Arora, Ramy Arnaout
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 34
Open Access | Times Cited: 14
MAVISp: A Modular Structure-Based Framework for Genomic Variant Interpretation
Matteo Arnaudi, Ludovica Beltrame, Kristine Degn, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 14
The Importance of Charge Transfer and Solvent Screening in the Interactions of Backbones and Functional Groups in Amino Acid Residues and Nucleotides
Vladimír Sládek, Dmitri G. Fedorov
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 21, pp. 13514-13514
Open Access | Times Cited: 14
MetaScore: A Novel Machine-Learning-Based Approach to Improve Traditional Scoring Functions for Scoring Protein–Protein Docking Conformations
Yong Gyu Jung, Cunliang Geng, Alexandre M. J. J. Bonvin, et al.
Biomolecules (2023) Vol. 13, Iss. 1, pp. 121-121
Open Access | Times Cited: 8
Solvated interaction energy: from small-molecule to antibody drug design
Enrico O. Purisima, Christopher R. Corbeil, Francis Gaudreault, et al.
Frontiers in Molecular Biosciences (2023) Vol. 10
Open Access | Times Cited: 8
Structural prediction of protein interactions and docking using conservation and coevolution
Jessica Andréani, Chloé Quignot, Raphaël Guérois
Wiley Interdisciplinary Reviews Computational Molecular Science (2020) Vol. 10, Iss. 6
Closed Access | Times Cited: 21
Predicting antibody affinity changes upon mutations by combining multiple predictors
Yoichi Kurumida, Yutaka Saitō, Tomoshi Kameda
Scientific Reports (2020) Vol. 10, Iss. 1
Open Access | Times Cited: 21
Are transient protein-protein interactions more dispensable?
Mohamed Ali Ghadie, Yu Xia
PLoS Computational Biology (2022) Vol. 18, Iss. 4, pp. e1010013-e1010013
Open Access | Times Cited: 13
Hom-Complex-Based Machine Learning (HCML) for the Prediction of Protein–Protein Binding Affinity Changes upon Mutation
Xiang Liu, Huitao Feng, Jie Wu, et al.
Journal of Chemical Information and Modeling (2022) Vol. 62, Iss. 17, pp. 3961-3969
Closed Access | Times Cited: 13
Graph masked self-distillation learning for prediction of mutation impact on protein–protein interactions
Yuan Zhang, Mingyuan Dong, Jianhua Deng, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 2
Assessment of software methods for estimating protein-protein relative binding affinities
Tawny R. Gonzalez, Kyle P. Martin, Jonathan E. Barnes, et al.
PLoS ONE (2020) Vol. 15, Iss. 12, pp. e0240573-e0240573
Open Access | Times Cited: 20
Using machine‐learning‐driven approaches to boost hot‐spot's knowledge
Nícia Rosário‐Ferreira, Alexandre M. J. J. Bonvin, Irina S. Moreira
Wiley Interdisciplinary Reviews Computational Molecular Science (2022) Vol. 12, Iss. 5
Open Access | Times Cited: 11
Computational optimization of angiotensin-converting enzyme 2 for SARS-CoV-2 Spike molecular recognition
Lorenzo Di Rienzo, Michele Monti, Edoardo Milanetti, et al.
Computational and Structural Biotechnology Journal (2021) Vol. 19, pp. 3006-3014
Open Access | Times Cited: 14
EnCPdock: a web-interface for direct conjoint comparative analyses of complementarity and binding energetics in inter-protein associations
Gargi Biswas, Debasish Mukherjee, Nalok Dutta, et al.
Journal of Molecular Modeling (2023) Vol. 29, Iss. 8
Open Access | Times Cited: 5
DeepRank: A deep learning framework for data mining 3D protein-protein interfaces
Nicolas Renaud, Cunliang Geng, Sonja Georgievska, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 12
MutateX: an automated pipeline forin-silicosaturation mutagenesis of protein structures and structural ensembles
Matteo Tiberti, Thilde Terkelsen, Tycho Canter Cremers, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2019)
Open Access | Times Cited: 12
Convergent structural features of respiratory syncytial virus neutralizing antibodies and plasticity of the site V epitope on prefusion F
Wayne Harshbarger, Sai Tian, Newton Wahome, et al.
PLoS Pathogens (2020) Vol. 16, Iss. 11, pp. e1008943-e1008943
Open Access | Times Cited: 12
KEAP1 Cancer Mutants: A Large-Scale Molecular Dynamics Study of Protein Stability
Carter J. Wilson, Megan Chang, Mikko Karttunen, et al.
International Journal of Molecular Sciences (2021) Vol. 22, Iss. 10, pp. 5408-5408
Open Access | Times Cited: 11
Computational analysis of sodium-dependent phosphate transporter SLC20A1/PiT1 gene identifies missense variations C573F, and T58A as high-risk deleterious SNPs
G. Siva Sankari, Remya James, Febby Payva, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 8, pp. 4072-4086
Closed Access | Times Cited: 4
Interpreting the effect of mutations to protein binding sites from large-scale genomic screens
Sara Jamshidi Parvar, Benjamin A. Hall, David Shorthouse
Methods (2024) Vol. 222, pp. 122-132
Open Access | Times Cited: 1
abCAN: a Practical and Novel Attention Network for Predicting Mutant Antibody Affinity
Chen Gong, Yue Shen, Hongde Liu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Predicting mutant outcome by combining deep mutational scanning and machine learning
Hagit Sarfati, Si Naftaly, Niv Papo, et al.
Proteins Structure Function and Bioinformatics (2021) Vol. 90, Iss. 1, pp. 45-57
Closed Access | Times Cited: 10
Computational approach for binding prediction of SARS-CoV-2 with neutralizing antibodies
Daria Beshnova, Yan Fang, Mingjian Du, et al.
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 2212-2222
Open Access | Times Cited: 7
The computational approach to variant interpretation
Selen Özkan, Natàlia Padilla, Alejandro Moles‐Fernández, et al.
Elsevier eBooks (2021), pp. 89-119
Closed Access | Times Cited: 9
Mutational Landscape of the Proglucagon-Derived Peptides
Peter Lindquist, Jakob Sture Madsen, Hans Bräuner‐Osborne, et al.
Frontiers in Endocrinology (2021) Vol. 12
Open Access | Times Cited: 9

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